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1 Inbreeding and relatedness coefficients: what do they measure?
https://www.nature.com/articles/6800065
More generally, inbreeding coefficients may be defined as a ratio of differences in probabilities of identity. A simple conceptual message ...
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2 Coefficient of relationship - ISOGG Wiki
https://isogg.org/wiki/Coefficient_of_relationship
The coefficient of relationship is a measure of the degree of consanguinity (or biological relationship) between two individuals.
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3 Coefficients of Inbreeding and Relationship - JSTOR
https://www.jstor.org/stable/2456273
The coefficient of inbreeding is obtained by a summation of coefficients for every line by which the parents are connected, each line tracing back from the ...
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4 COI FAQS: Understanding the Coefficient of Inbreeding
https://www.instituteofcaninebiology.org/blog/coi-faqs-understanding-the-coefficient-of-inbreeding
So, in terms of health, a COI less than 5% is definitely best. Above that, there are detrimental effects and risks, and the breeder needs to ...
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5 Inbreeding and relatedness coefficients: what do ... - PubMed
https://pubmed.ncbi.nlm.nih.gov/11986874/
Then some of their properties are derived from an assumption in terms of differences between distributions of coalescence times of different genes. These ...
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6 Inbreeding calculators (COIs) | Dog health - The Kennel Club
https://www.thekennelclub.org.uk/health-and-dog-care/health/getting-started-with-health-testing-and-screening/inbreeding-calculators/
The degree of inbreeding can be measured using a calculation called the coefficient of inbreeding (CoI), or inbreeding coefficient.
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7 Chapter 6.10: Inbreeding coefficient and relationship
https://wiki.groenkennisnet.nl/space/TAB/3738465
= ½ * · parents ; INTERMEZZO: Why is · = ½ * · parents? ; The inbreeding coefficient of an animal indicates the probability that the animal becomes ...
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8 Relationship and inbreeding, calculation example
http://www.ihh.kvl.dk/htm/kc/popgen/genetics/4/2.htm
The coefficient of relationships (a) is calculated by tracing all possible relations between the two parents through the common ancestors. Note the dotted lines ...
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9 Relatedness
https://www.mun.ca/biology/scarr/4250_Measurement_of_relatedness.html
The coefficient of relatedness (r) is the fraction of alleles that two individual have in common. If two individuals are related, their offspring will be ...
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10 The value of genomic relationship matrices to estimate levels ...
https://gsejournal.biomedcentral.com/articles/10.1186/s12711-021-00635-0
When inbreeding coefficients are interpreted as indicators of variability (heterozygosity) that was gained or lost relative to a base population ...
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11 Coefficient of inbreeding (r)
https://www.rcpath.org/asset/BB0C4427-DD8C-4F2F-A09E504DFBF711F1/
Coefficient of inbreeding (r). Relationship between parents. 100%. Identical twins. 50%. Parent and child. 50%. Full siblings (brothers and sisters).
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12 Pairwise relatedness testing in the context of inbreeding
https://link.springer.com/article/10.1007/s00414-020-02426-6
Coefficients of inbreeding and kinship. The coefficient of inbreeding f, introduced by Wright [6], is the probability that an individual is ...
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13 Inbreeding Coefficient - an overview | ScienceDirect Topics
https://www.sciencedirect.com/topics/agricultural-and-biological-sciences/inbreeding-coefficient
If a child is inbred through more than one line of descent, the total coefficient of inbreeding is the sum of each of the separate coefficients. For example, ...
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14 Inbreeding coefficient in GeneticsPed: Pedigree and ... - Rdrr.io
https://rdrr.io/bioc/GeneticsPed/man/inbreeding.html
Coefficient of inbreeding (F) represents probability that two alleles on a loci are identical by descent (Wright, 1922; Falconer and Mackay, 1996). Wright (1922) ...
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15 Kinship and Inbreeding - Fernando - Major Reference Works
https://onlinelibrary.wiley.com/doi/abs/10.1002/9780470015902.a0005398.pub2
The kinship coefficient quantifies the genetic similarity between two individuals by the probability that randomly sampled homologous genes ...
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16 INBREEDING AND RELATEDNESS
https://si.biostat.washington.edu/sites/default/files/modules/3.InbreedingRelatedness_0.pdf
Therefore ibd is a relative, not an absolute, concept. Wright S. 1922. Coefficients of inbreeding and relationship. Am Naturalist. 56:330-338. Malécot G.
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17 Inbreeding Coefficient Overview, Purpose & Calculation
https://study.com/learn/lesson/inbreeding-coefficient-overview-purpose-calculation.html
An inbreeding coefficient of .25 or 25%, for instance, represents an individual with a 25% chance of having two identical alleles for the same ...
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18 Measuring Relatedness between Inbred Individuals
https://academic.oup.com/jhered/article/106/1/20/2961876
The additive genetic correlation among relatives is given by Wright's measure, rxy*, but its calculation (expression 3) requires knowledge of the inbreeding ...
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19 Methods for calculation of inbreeding coefficient
https://www.basu.org.in/wp-content/uploads/2021/04/Inbreeding_Coefficient___its_measurement.pptx
The degree of inbreeding of an individual depends upon the degree of relationship between the parents of the inbred individual. Prof.
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20 Difference between inbreeding, relationship percentage and ...
https://www.zooeasy.com/news/inbreeding-relationship-avk/
These genes are passed on from generation to generation. The relationship coefficient is calculated by ZooEasy on the basis of the pedigree. The ...
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21 What is a Coefficient of Inbreeding?
https://stcroixsheep.org/what-is-a-coefficient-of-inbreeding/
A coefficient of inbreeding is a measure of how much homozygosity we expect as a consequence of inbreeding. Genes are said to be heterozygous when an ...
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22 Kinship Coefficients
https://genome.sph.umich.edu/w/images/1/1f/666.2017.12_-_Kinship_Coefficients.pdf
Can be used to study relationship between genetic similarity and ... The kinship coefficient is related to the inbreeding coefficient.
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23 Inbreeding & Relatedness Coefficients extended - TrueNicks
https://www.truenicks.com/articles/241169/inbreeding-relatedness-coefficients-extended
The coefficient of inbreeding (COI) was introduced by Sewell Wright back in 1922 to express the expected percentage of homozygosity (closeness ...
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24 Significant Relationships
https://www.dogenes.com/essays/relation.html
The inbreeding coefficient is a function of the number and location of the common ancestors in a pedigree. It is not a function, except indirectly, of the ...
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25 Inbreeding calculator - Andrzej Sobczyk
https://www.sobczyk.eu/inb/
The correlation between the breeding values of two individuals due to pedigree relationship alone. The coefficient of relationship (RC) provides a way of ...
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26 Inbreeding: Its Meaning, Uses and Effects on Farm Animals
https://extension.missouri.edu/publications/g2911
1. In a linebreeding program, the coefficient of relationship between mates is usually low; however, it can be quite variable. 2. Random mating within a ...
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27 Computational Details - SAS Help Center
https://documentation.sas.com/doc/en/statcdc/14.2/statug/statug_inbreed_details03.htm
To calculate the inbreeding coefficient and the covariance coefficients, use the degree of relationship by descent between the two parents, which is called ...
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28 A spectral theory for Wright's inbreeding coefficients ... - PLOS
https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1009665
Wright's inbreeding coefficient, FST, is a fundamental measure in population genetics. Assuming a predefined population subdivision, ...
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29 Web Coefficient of inbreeding - Insilicase
http://www.insilicase.com/web/WebC_of_I.aspx
The program also calculates the F (coefficient of inbreeding) and R (coefficient of relationship) for the child's parents. The structure of the input text and ...
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30 Inbreeding Coefficient - HerfNet
http://www.herfnet.com/online/pages/USHF/inb/inbreeding_coefficient_help.htm
Typical Inbreeding Coefficients ; Animal mated to its own parent (eg Sire / daughter), 25% ; Half sib matings (parents have a common sire or dam), 12.5% ; Full sib ...
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31 Calculating Inbreeding Coefficients from Pedigrees
https://nature.berkeley.edu/classes/espm-103/Ballou-Inbreeding%20Coefficients.pdf
tive Relationship method. Path Analysis Technique. Once a pedigree of an individual (say X) is obtained, we can calculate its in- breeding coefficient ...
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32 Estimators for pairwise relatedness and individual inbreeding ...
https://www.cambridge.org/core/journals/genetics-research/article/estimators-for-pairwise-relatedness-and-individual-inbreeding-coefficients/9AE218BF6BF09CCCE18121AA63561CF7
Method-of-moments estimators (MMEs) for the two-gene coefficients of relationship and inbreeding, and for thxe four-gene Cotterman coefficients, ...
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33 III. Pedigreed Populations and Close Inbreeding
https://pba.ucdavis.edu/files/149792.pdf
With no previous inbreeding or relationship this reduces to fpo. This result has already been obtained as the inbreeding coefficient of X, the offspring of P ...
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34 iterative calculation of inbreeding and relationship coefficient
http://www.wcgalp.org/system/files/proceedings/1994/iterative-calculation-inbreeding-and-relationship-coefficient.pdf
ITERATIVE CALCULATION OF INBREEDING AND RELATIONSHIP COEFFICIENT'. Z. W., Zhang. Institute of Anim. Sci., Chinese Academy of Agricultural Sciences, Beijing, ...
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35 Pedigree-based inbreeding coefficient explains more variation ...
https://royalsocietypublishing.org/doi/10.1098/rspb.2016.2763
Traditionally, inbreeding depression is quantified as the relationship between fitness and pedigree-based inbreeding coefficient F. F estimates ...
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36 GeneticsPed: Pedigree and genetic relationship functions
https://www.bioconductor.org/packages/devel/bioc/manuals/GeneticsPed/man/GeneticsPed.pdf
It also includes functions to calculate genetic relationship measures as relationship and inbreeding coefficients and other utilities. Note that package is not ...
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37 Introduction to Genetic Relatedness
https://www.colorado.edu/ibg/introduction-genetic-relatedness-slides
Inbreeding coefficient. Probability that the two alleles at a locus for an individual was inherited from the same genome. Coefficient of relationship.
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38 INBREEDING AND GENETIC DRIFT - UCL
https://www.ucl.ac.uk/~ucbhdjm/courses/b242/InbrDrift/InbrDrift.html
The INBREEDING COEFFICIENT, F, is used to gauge the strength of inbreeding. F = probability that two alleles in an individual are identical by descent (IBD) ...
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39 Calculation Of The Coefficient Of Relationship
http://www.genetic-genealogy.co.uk/genetics/Toc115570135.html
The standard procedure for measuring degrees of relationship quantitatively uses Sewall Wright's method of path coefficients (Wright, 1922). The measure, known ...
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40 Revised Calculation of Kalinowski's Ancestral and New ...
https://www.mdpi.com/1424-2818/12/4/155
The degree of inbreeding is typically measured with pedigree-based inbreeding coefficients, as introduced by Wright [1]. Individuals with higher inbreeding ...
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41 Wright, S. 1922. Coefficients of inbreeding and relationship ...
https://www.ars.usda.gov/ARSUserFiles/80420530/Publications/contributed/wright1922.pdf
Wright, S. 1922. Coefficients of inbreeding and relationship. The American Naturalist 56:330-338. Page 2. Page 3. Page 4. Page 5. Page 6. Page 7. Page 8 ...
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42 Inbreeding - Cytoscape App Store
https://apps.cytoscape.org/apps/inbreeding
Inbreeding app, given a mating network, calculates the inbreeding and relationship coefficients of all the individuals in the network.
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43 Calculate Coefficient of Inbreeding - Code Golf Stack Exchange
https://codegolf.stackexchange.com/questions/196216/calculate-coefficient-of-inbreeding
The Coefficient of Inbreeding is equal to the Coefficient of Relationship of the parents. The Coefficient of Relationship between two people ...
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44 Correlation of Genomic and Pedigree Inbreeding Coefficients ...
https://mdpi-res.com/d_attachment/animals/animals-11-03234/article_deploy/animals-11-03234.pdf?version=1636708775
Keywords: Holstein cattle; inbreeding coefficient; ... Inbreeding coefficient calculated through genomic relationship matrix.
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45 Procedures for calculating estimates of the coefficient ... - CORE
https://core.ac.uk/download/pdf/33362738.pdf
alent to Wright's term, coefficient of inbreeding. Malecot 's procedure involves the relationship between two individuals; henceforth, let "coefficient de ...
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46 A relationship with the same IBD coefficients as quadruple half ...
https://www.researchgate.net/figure/A-relationship-with-the-same-IBD-coefficients-as-quadruple-half-first-cousins_fig5_342019921
We study an extension of the standard framework for pedigree analysis, in which we allow pedigree founders to be inbred. This solves a number of practical ...
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47 The impact of ignoring inbreeding in pairwise kinship ...
https://www.fsigeneticssup.com/article/S1875-1768(19)30295-1/fulltext
To compare estimates of κ for inbred relationships and Δ, we calculate φ from both sets of coefficients. Fig. 1d shows φ for the inbred ...
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48 Inbreeding Coefficient – GATK
https://gatk.broadinstitute.org/hc/en-us/articles/360035531992-Inbreeding-Coefficient
Although the name Inbreeding Coefficient suggests it is a measure of inbreeding, Inbreeding Coefficient measures the excess heterozygosity ...
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49 inbreeding
http://istocar.bg.ac.rs/images/V23_I5-6-2/V23_I5-6-2_13.pdf
relationships, collateral relationships and inbreeding coefficient. Key words: breeding, relationships, ascendants, descendents. Introduction.
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50 Computer determination of the inbreeding coefficient ...
https://dl.acm.org/doi/10.1145/503810.503826
Computer determination of the inbreeding coefficient, coefficient of relationship, and the ancestral composition in closed beagle colony · Authors: · Jeanne A.
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51 Science versus Star Wars: “Reylo” and the inbreeding coefficient
https://blog.23andme.com/articles/science-versus-star-wars-reylo-and-the-inbreeding-coefficient/
In basic terms, someone's coefficient of inbreeding is half of the degree of relationship between their parents, where the parents' relationship degree is ...
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52 Analysis of structure of the population, kinship coefficients and ...
https://www.biorxiv.org/content/10.1101/2020.02.19.956045v1.full
Based on the results, it must be assumed that the maximum inbreeding rate (FX) in the analysed breed should not exceed 6.85%, whereas the ...
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53 Inbreeding depression across the lifespan in a wild ... - PNAS
https://www.pnas.org/doi/10.1073/pnas.1518046113
Here, in a species with extended maternal care, genomic inbreeding coefficients, but not pedigree-based ones, revealed inbreeding depression in annual breeding ...
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54 Genetic Analysis of Breeds Versus Natural Populations ... - VIN
https://www.vin.com/c/pdf/6975922
generational inbreeding coefficient is 50.3%. RELATIONSHIP COEFFICIENTS. -Individuals within a breed all share approximately the.
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55 Relationship between the magnitude of the inbreeding ...
https://www.geneticsmr.org/articles/relationship-between-the-magnitude-of-the-inbreeding-coefficient-and-milk-traits-in-holstein-and-jersey-dairy-bull-semen.pdf
Relationship between the magnitude of the inbreeding coefficient and milk traits in Holstein and Jersey dairy bull semen used in Brazil.
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56 Blackbelly Sheep Coefficient of Inbreeding
https://www.blackbellysheep.org/about-the-sheep/coefficient-of-inbreeding/
Inbreeding coefficient, COI, is a percentage of probability that the ram and ewe share a common ancestor that contributed a common gene. 0% COI indicates that ...
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57 Coefficient of inbreeding - Wikiwand
https://www.wikiwand.com/en/Coefficient_of_inbreeding
The coefficient of inbreeding is: The probability that two alleles at a given locus are identical by descent. ... The coefficient of relationship is: The ...
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58 EasyNRM: A Visual Basic Application Approach for ...
http://dogadergi.ksu.edu.tr/tr/download/article-file/833123
Inbreeding coefficient. Numerator relationship matrix. Tabular method. Microsoft Excel. Visual Basic for Application. Pedigrili Hayvanlarda Paydan Akrabalık ...
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59 ribd: Pedigree-based Relatedness Coefficients
https://cran.r-project.org/web/packages/ribd/ribd.pdf
relationship collapses into siblings.) References. M. D. Vigeland (2020). Relatedness coefficients in pedigrees with inbred founders.
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60 Relatedness coefficients in pedigrees with inbred founders
https://d-nb.info/1217530436/34
that the inbreeding coefficient f measuring the expected amount of IBD ... We define a pairwise relationship to be a triple (a, b, P), ...
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61 Relationship and inbreeding coefficients
https://fvtm.stafpu.bu.edu.eg/Animal%20wealth%20development/975/crs-14725/Practical%20Animal%20Breeding_2.pdf
Computing relationship and inbreeding using path coefficients. ○ Wright is responsible for the idea of tracing paths to establish the.
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62 Demystifying Inbreeding - Dog Aging Project
https://dogagingproject.org/inside-foundation-demystifying-inbreeding/
The average COI for purebred dogs is ~20%. Specific breeds can be higher or lower than this value. For some breeds, the average coefficient of ...
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63 Calculation and Use of Inbreeding Coefficients for Genetic ...
https://www.aipl.arsusda.gov/publish/jds/1995/78_1584.pdf
ing percentage was released to the dairy industry for bulls. (Key words: inbreeding, relationship matrix, genetic evaluation). Abbreviation key: ID = ...
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64 Dog Genetics 4.1: Inbreeding Calculator, Detailed Instructions ...
http://labgenvet.ca/en/dog-genetics-4-1-inbreeding-calculator-detailed-instructions-and-interpretation/
An elevated inbreeding coefficient for an animal indicates that the undesirable effects of inbreeding (i.e. inbreeding depression) will start to be evident. On ...
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65 the coefficient of common identity - IB-USP
https://www.ib.usp.br/~otto/downloads/pdf_otto/rbge07.pdf
the numerical identity relating Wright's coefficient of relationship (FAR) and inbreed- ing (F) has led to a great deal of confusion that still prevails in ...
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66 Inbreeding - Basicmedical Key
https://basicmedicalkey.com/inbreeding/
The inbreeding coefficient (typically denoted by the symbol F) is the probability that an inbred individual has two alleles at a given locus ...
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67 Alternative Ways of Computing the Numerator Relationship ...
https://www.frontiersin.org/articles/10.3389/fgene.2021.655638/full
Calculating inbreeding coefficients was extremely fast (<0.2 s for 180K). Parallel computing (15 cores) was adopted for methods that were based ...
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68 Computing inbreeding coefficients quickly - Archive ouverte HAL
https://hal.archives-ouvertes.fr/hal-00893856/document
inbreeding as being deleterious and consequently try to avoid mating close relatives. The relationship between prospective mates can be computed ...
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69 What is the coefficient of inbreeding (COI)? - ASHGI
https://www.ashgi.org/breeding-coi
COI is a measure of the common relationship between the two sides of a pedigree. Specifically, it is the measure of how likely any particular gene is to be ...
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70 Dog Inbreeding, Its Consequences, And Its Quantification
https://embarkvet.com/resources/oedipus-rex-inbreeding-its-consequences-and-its-quantification/
› resources › oedipus-rex-inbree...
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71 Estimation of Inbreeding Coefficient in Corriedale Sheep
https://www.ijcmas.com/8-4-2019/Nusrat%20Nabi,%20et%20al.pdf
The coefficient of inbreeding ranged from 0 to 37.5 in inbred lambs. It was ... degree of relationship that exists in the.
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72 Significant Relationships - Leonberger Database
http://leonberger-database.com/coi_e.html
The inbreeding coefficient is a function of the number and location of the common ancestors in a pedigree. It is not a function, except indirectly, of the ...
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73 Coefficient of Inbreeding - Wright's Equation and Hardiman's ...
https://www.bloodlines.net/highflyer/coefficient.htm
Simply put, Cedric's inbreeding coefficient is found by calculating ½ to the power n, where n is the number of individuals from Cedric to the common ancestor ...
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74 diversity - Semantic Scholar
https://pdfs.semanticscholar.org/b3c4/3fc9a4c29b7cf95e2d54837b86001f97f856.pdf
inbreeding coefficient, which is the probability that a random allele in ... that show a correlation of >0.999 with inbreeding coefficients ...
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75 Understanding the relationship between the inbreeding ...
https://europepmc.org/article/med/15254488
Inbreeding coefficient, but not multilocus heterozygosity, detected evidence of inbreeding depression for morphological traits. The relevance of these findings ...
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76 A Beginner's Guide to COI - Dog Breed Health
https://www.dogbreedhealth.com/a-beginners-guide-to-coi/
COI stands for Coefficient of Inbreeding. Essentially, it measures the common ancestors of dam and sire, and indicates the probability of how genetically ...
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77 Total proportion of shared genes = 4/16 = ¼
https://iu.instructure.com/courses/1589968/files/64741613/download
Determination of Degrees of Relationship ... Coefficient of Inbreeding (F) ... Each vertical level of a pedigree represents one degree of relationship.
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78 Comparative analysis of inbreeding parameters and runs of ...
https://www.journalofdairyscience.org/article/S0022-0302(21)01064-X/pdf
using a genomic relationship matrix (GRM; VanRaden et al., 2011); (3) methods based on runs of ... The correlation coefficients between inbreeding esti-.
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79 ASC-223: Inbreeding in Sheep - UK College of Agriculture
http://www2.ca.uky.edu/agc/pubs/ASC/ASC223/ASC223.pdf
this relationship is very slight. Therefore, inbreeding is ... inbreeding coefficient measures the per- ... breeding coefficient of 0.25, it is expected.
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80 Inbreeding in Cattle
https://www.thecattlesite.com/articles/755/inbreeding-in-cattle/
If a bull has an inbreeding coefficient of .25, he is expected to have 25 percent more homozygous gene pairs than a non-inbred individual from the same ...
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81 Inbreeding Coefficient Calculator - BullyPedigrees.com
https://bullypedigrees.com/inbreeding-calculator/
The "Coefficient Of Inbreeding", or COI, commonly labeled F and expressed as a percent, is a measure of the amount of consanguinity in an individual's ...
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82 COI – the Co-efficient of Inbreeding, does it matter?
https://www.aces-upakitas.com/post/coi-the-co-efficient-of-inbreeding-does-it-matter
THE IDEA BEHIND COI For close to 100 years (1920s) breeders have had the option of using the Coefficient of Inbreeding. The COI is the ...
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83 Statistical Methods for Kinship Analysis - STRBase
https://strbase.nist.gov/pub_pres/Lewis-Towson-kinship-Apr2010.pdf
Inbreeding coefficient of an individual is the coancestry of its parents ... allele probabilities and IBD relationship ...
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84 Estimation of Inbreeding by Conventional and Molecular ...
http://ijlr.org/issue/estimation-of-inbreeding-by-conventional-and-molecular-methods-a-review/
Two alternative approaches that can be used to measure how inbred an individual is the use of pedigree records to estimate inbreeding coefficients or molecular ...
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85 Please calculate Inbreeding Coefficient FA and Relationship ...
https://www.numerade.com/ask/question/please-calculate-inbreeding-coefficient-fa-and-relationship-coefficient-rco-according-the-pedigree-below-this-question-is-worth-10-points-and-will-be-manually-graded_-details-are-required-e-91818/
Okay, so the inbreeding coefficient I see Is equal to 1 to the end over to. So there for ...
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86 Medical Definition of Inbreeding, coefficient of - RxList
https://www.rxlist.com/inbreeding_coefficient_of/definition.htm
Inbreeding, coefficient of: A measure of how close two people are genetically to each another. The coefficient of inbreeding, symbolized by the letter F, ...
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87 Coefficient of relationship
https://en-academic.com/dic.nsf/enwiki/343475
Coefficient of relationship · coefficient of relationship or · coefficient of relatedness or · relatedness or r is defined as 2 times the Coefficient of Inbreeding ...
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88 Coefficient of relationship - Alchetron, the free social ...
https://alchetron.com/Coefficient-of-relationship
A coefficient of inbreeding can be calculated for an individual, as a measure for the amount of pedigree collapse within that individual's ...
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89 Chapter 3: Calculating individual inbreeding values
https://www.fao.org/3/x3840e/X3840E03.htm
All values in a table of covariance values are CovBI values, which means the inbreeding that will be produced by any mating combination is half the CovBI value ...
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90 Inbreeding Coefficient — ISAA
https://www.icelanddogs.com/inbreeding-coefficient
This number, the inbreeding coefficient, estimates the percentage of identical genes that are inherited. Inbreeding coefficients are estimates, not guarantees.
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